The detailed information of tRNA gene sequence


Sequence ID>ENV09003813
Genome IDADGO01183144
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 40
End posion on genome 134
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccctccccc
tRNA gene sequence 
GGAGAGGTGCCGGAGTCTGGTTTAACGGGCCGTCCTGGAAAGACGGGTGAGCCCTCAGCG
GGGCTCCGCAGGTTCAAATCCTGTCCTCTCCGCCA
Downstream region at tRNA end position 
ggctcgaccg
Secondary structure (Cloverleaf model)
>ENV09003813	Ser	GGA
                   c      GCCA ggctcgaccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
    C T G A        G      + | | | |     A
  T         G G C C       G C A G G     C
  G           | | |                 T T
  G         A C G G
    T T T A        G     GTGAGCCCTCAGCGGGGCTCC
                    C - G
                    C - G
                    G - C
                    T - A
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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