The detailed information of tRNA gene sequence


Sequence ID>ENV09003828
Genome IDADGO01188350
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 19
End posion on genome 108
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atagacaatc
tRNA gene sequence 
GGAGGGGTGTCCGAGCGGTCTAAGGAGACGGTCTTGAAAACCGTTAGGCCCCGCAAGGGG
TCTCGCGGGTTCGAATCCCGCCCCCTCCGCtc
Downstream region at tRNA end position 
agttctcctg
Secondary structure (Cloverleaf model)
>ENV09003828	Ser	TGA
                   c      GCtc agttctcctg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G C G G G     C
    G         | | |                 T T
    T       A G G A
      C T A        G     TAGGCCCCGCAAGGGGTCTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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