The detailed information of tRNA gene sequence


Sequence ID>ENV09003831
Genome IDADGO01189607
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 307
End posion on genome 385
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tctttttcgT
tRNA gene sequence 
GGCTGCGTAGCTCAGTCGGTCAGAGCGCCACACTCATAATGTGGAGGCCCCCTGGTTCGA
GTCCAGGCGCAGCTACCC
Downstream region at tRNA end position 
cacccccttg
Secondary structure (Cloverleaf model)
>ENV09003831	Met	CAT
                   T      ACCC cacccccttg
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     G - C          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    C       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGCCC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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