The detailed information of tRNA gene sequence


Sequence ID>ENV09003845
Genome IDADGO01192446
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 70
End posion on genome 160
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttttatttt
tRNA gene sequence 
GGATGGTTACTCAAGTCAGGTTAAGAGGGCTGCTTGCTACGCAGTTAGCCGGGTTTCCCG
GGCAGGGGTTCGAATCCCTTACCATCCACCA
Downstream region at tRNA end position 
tttatattat
Secondary structure (Cloverleaf model)
>ENV09003845	Ser	GCT
                   t      ACCA tttatattat
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     T - A          T A
                    T     T T C C C     A
    C T G A        A      | + | | |     G
  A         A C T C       A G G G G     C
  G           | | |                 T T
  G         A G A G
    T T A          G     TAGCCGGGTTTCCCGGGC
                    G + T
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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