The detailed information of tRNA gene sequence


Sequence ID>ENV09003905
Genome IDADGO01210099
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 196
End posion on genome 123
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCGGAAGTAGCTCAATTGGTAGAGCGATAGCCTTCCAAGCTATAGGTTGCGGGTTCGAGA
CCCGTCTTCCGCTCat
Downstream region at tRNA end position 
cgtgtgttcc
Secondary structure (Cloverleaf model)
>ENV09003905	Gly	TCC
                   n      TCat cgtgtgttcc
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          A G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    A - T
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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