The detailed information of tRNA gene sequence


Sequence ID>ENV09003919
Genome IDADGO01213580
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 148
End posion on genome 78
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position 
nntaaaaaga
tRNA gene sequence 
AATGGGGTGGAGTAAAGGTAGCTCATTGGCGTCATTACCCAAAGGTCTAGGTTCAATTCC
TAGCCCCGTGCatt
Downstream region at tRNA end position 
ttaaaaaaat
Secondary structure (Cloverleaf model)
>ENV09003919	Pseudo	CAT
                   a      Catt ttaaaaaaat
                     A   G
                     A - T
                     T + G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    T     G A T C C     A
        A A        G      | | | | |     A
      A     T G A G       C T A G G     C
      G     + | | |                 T T
      G     G C T C
        T A        A     AGGT
                    T - A
                    T - A
                    G - C
                    G - C
                    C   C
                  G       A
                  T       T
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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