The detailed information of tRNA gene sequence


Sequence ID>ENV09003974
Genome IDADIF01005078
Search identical group
Phylum/ClassMarine metagenome apSum_C1
Species
Start position on genome 309
End posion on genome 220
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgccgccaac
tRNA gene sequence 
GGATCGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGTGACCGTC
TCCAGGGTTCGAATCCCTGTCGATCCGCCA
Downstream region at tRNA end position 
caaactgcct
Secondary structure (Cloverleaf model)
>ENV09003974	Ser	GGA
                   c      GCCA caaactgcct
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGTGACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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