The detailed information of tRNA gene sequence


Sequence ID>ENV09004029
Genome IDADIG01001046
Search identical group
Phylum/ClassGroundwater metagenome 4000601.lucy.pga.C1
Species
Start position on genome 129757
End posion on genome 129849
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcaaaacccc
tRNA gene sequence 
GGAGAGATGCCCGAGTGGCCGAAGGGGCTCCCCTGCTAAGGGAGTATCGGGTCAAAAGCC
TGATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gatacgcaaa
Secondary structure (Cloverleaf model)
>ENV09004029	Ser	GCT
                   c      GCCA gatacgcaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TATCGGGTCAAAAGCCTGATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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