The detailed information of tRNA gene sequence


Sequence ID>ENV09004030
Genome IDADIG01001046
Search identical group
Phylum/ClassGroundwater metagenome 4000601.lucy.pga.C1
Species
Start position on genome 277460
End posion on genome 277552
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcatccatgt
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCTTATACCC
GTATCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gtttcgcagt
Secondary structure (Cloverleaf model)
>ENV09004030	Ser	GGA
                   t      GCCA gtttcgcagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G C G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATACGGCTTATACCCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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