The detailed information of tRNA gene sequence


Sequence ID>ENV09004042
Genome IDADIG01001058
Search identical group
Phylum/ClassGroundwater metagenome 4000601.lucy.pga.C1
Species
Start position on genome 952
End posion on genome 877
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ctaaaattcc
tRNA gene sequence 
GCTCATGTAGCTCAGTCGGTAGAGCACTTCCTTGGTAAGGAAGAGGTCACAGGTTCGATT
CCTGTCATGAGCACCA
Downstream region at tRNA end position 
ttcattcgac
Secondary structure (Cloverleaf model)
>ENV09004042	Thr	GGT
                   c      ACCA ttcattcgac
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     T - A
                     G - C          T T
                    T     T G T C C     A
      T G A        A      | | | | |     G
    C       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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