The detailed information of tRNA gene sequence


Sequence ID>ENV09004048
Genome IDADIG01001061
Search identical group
Phylum/ClassGroundwater metagenome 4000601.lucy.pga.C1
Species
Start position on genome 139429
End posion on genome 139505
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctcctgcac
tRNA gene sequence 
GGGCCTATAGCTCAATTGGTTAGAGCAGCGGACTCATAATCCGTTGGTTCCAGGTTCAAG
TCCTGGTGGGCCCACCA
Downstream region at tRNA end position 
tccaagcgca
Secondary structure (Cloverleaf model)
>ENV09004048	Met	CAT
                   c      ACCA tccaagcgca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G T C C     A
      T A A        A      | | | | |     A
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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