The detailed information of tRNA gene sequence


Sequence ID>W2110155232
Genome IDJAAOMS010000059
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus caldus CV18-1 [JAAOMS]
Start position on genome 10568
End posion on genome 10492
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ccggcgtttc
tRNA gene sequence 
GGGCCTGTAGCTCAGCTGGTCAGAGCAGGGGACTCATAATCCCTTGGTCCTCGGTTCGAA
TCCGAGCGGGCCCACCA
Downstream region at tRNA end position 
aataaaacag
Secondary structure (Cloverleaf model)
>W2110155232	Ile2	CAT
                   c      ACCA aataaaacag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     G A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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