The detailed information of tRNA gene sequence


Sequence ID>ENV09004220
Genome IDADKK01000197
Search identical group
Phylum/ClassHot springs metagenome ctg_1106445177583
Species
Start position on genome 23678
End posion on genome 23769
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttagattacT
tRNA gene sequence 
GGATGGGTGTCCGAGTGGCCGAAGGAGCAGCACTGGAAATGCTGTGTACGGGTAATCCCC
GTACCGCGGGTTCGAATCCCGCCCCATCCGTta
Downstream region at tRNA end position 
gaggttgaga
Secondary structure (Cloverleaf model)
>ENV09004220	Ser	GGA
                   T      GTta gaggttgaga
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G C G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TGTACGGGTAATCCCCGTACC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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