The detailed information of tRNA gene sequence


Sequence ID>W2110169565
Genome IDJABBHQ010000063
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferridurans ATCC 33020 [JABBHQ]
Start position on genome 48129
End posion on genome 48218
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agttgtacct
tRNA gene sequence 
GGAAGGTTGCCGGAGTGGCTTAACGGCGCGGCTTTGAAACCCGATGGTCTGGGAACAGAC
ACCAGAGTTCGAATCTCTGACCTTCCGCCA
Downstream region at tRNA end position 
atttcccgcg
Secondary structure (Cloverleaf model)
>W2110169565	Ser	TGA
                   t      GCCA atttcccgcg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     G T C T C     A
      T G A        G      | | | | |     G
    G       G G C C       C A G A G     C
    G         | | |                 T T
    C       A C G G
      T T A        C     TGGTCTGGGAACAGACAC
                    G   A
                    C - G
                    G - C
                    G - C
                    C   C
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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