The detailed information of tRNA gene sequence


Sequence ID>W2110178342
Genome IDJABFOH010000003
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferrooxidans DSM 16786 [JABFOH]
Start position on genome 53482
End posion on genome 53391
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaccaacaaa
tRNA gene sequence 
GGAAGCGTGGCGGAGCCAGGCTGAACGCACCGTCCTCGAAAGTCGGCAAATCTGAAAAGG
TTTCGCAGGTTCAAATCCTGCCGCTTCCGCCA
Downstream region at tRNA end position 
atcattgggg
Secondary structure (Cloverleaf model)
>W2110178342	Ser	CGA
                   a      GCCA atcattgggg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
    C C G A        G      | | | | |     A
  A         G G C G       G C A G G     C
  G           | | |                 T T
  G         A C G C
    C T G A        A     CAAATCTGAAAAGGTTTC
                    C - G
                    C - G
                    G - C
                    T   T
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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