The detailed information of tRNA gene sequence


Sequence ID>FG090100012
Genome IDAE016814
Search identical group
Phylum/ClassAscomycota
SpeciesAshbya gossypii ATCC 10895
Chromosome chr1
Start position on genome 253864
End posion on genome 253792
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ctgcataggaccggatctcttagatctagcgtcaaaccatagcgtcatctgattagcaagccgcaataaattatactttcagaattattattccaatata
tRNA gene sequence 
GTTCCAATAGTGTAGTGGCTATCACGTTGCCTTCACACGGCAAAGGTCCTGAGTTCGATC
CTCAGTTGGAACAttt
Downstream region at tRNA end position 
gattcttttttgcactggttttctcaacgtttctggaagcgtggggaagaggcgatcctcagagggcccgcaagaagcttcggccgagacagtaacgatg
Secondary structure (Cloverleaf model)
>FG090100012	Val	CAC
                   a      Attt gattcttttttgcactggttttctcaacgtttctggaagcgtggggaagaggcgatcctcagagggcccgcaagaagcttcggccgagacagtaacgatg
                     G - C
                     T - A
                     T - A
                     C - G
                     C - G
                     A - T
                     A - T          C T
                    T     G A C T C     A
      T G A        A      | | | | |     G
    G       T G T G       C T G A G     C
    G         | | |                 T T
    C       T C A C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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