The detailed information of tRNA gene sequence


Sequence ID>FG090100020
Genome IDAE016816
Search identical group
Phylum/ClassAscomycota
SpeciesAshbya gossypii ATCC 10895
Chromosome chr3
Start position on genome 52177
End posion on genome 52248
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gatgcatatgttctgcaatggtttaaacagcacagtttagagattgacattaaataccactcgcagctatggttcatcttacgtttcattagacaagttg
tRNA gene sequence 
TCCGCGATAGTTTAATGGTTAGAATTCGCGCTTGTCGCGCGCGGGATCGGGGTTCAATTC
CCCGTCGCGGAGttt
Downstream region at tRNA end position 
tttccaacccgcaattggagtcacgtgataactgtccaataatatacagttatttgatgagccatacaccacgcccaacactgcaatttttcggtttcgc
Secondary structure (Cloverleaf model)
>FG090100020	Asp	GTC
                   g      Gttt tttccaacccgcaattggagtcacgtgataactgtccaataatatacagttatttgatgagccatacaccacgcccaacactgcaatttttcggtttcgc
                     T - A
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T T
                    T     G C C C C     A
      T A A        A      | | | | |     A
    G       T T T G       C G G G G     C
    G       + | | +                 T T
    T       G A A T
      T A          T     GGAT
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  T       C
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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