The detailed information of tRNA gene sequence


Sequence ID>FG090100042
Genome IDAE016818
Search identical group
Phylum/ClassAscomycota
SpeciesAshbya gossypii ATCC 10895
Chromosome chr5
Start position on genome 548347
End posion on genome 548420
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gacgctaccaatggctgcaacggtgcccgtggccggcggtcacagggcaacgtaaccaccatgattacgcgcgctcagacttctcccatacacatttctT
tRNA gene sequence 
AGCGTTGTGGCGCAGTGGAAGCGCGCAGGGCTCATAACCCTGATGTCCCAGGATCGAAAC
CTGGCAACGCTATtt
Downstream region at tRNA end position 
ttttggccagccagagcagttggctataaacgctgtctacactacatactcaggcaactgcacgccggaaggcagacttcgcctcccgcacccggcgcag
Secondary structure (Cloverleaf model)
>FG090100042	Met	CAT
                   T      ATtt ttttggccagccagagcagttggctataaacgctgtctacactacatactcaggcaactgcacgccggaaggcagacttcgcctcccgcacccggcgcag
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A
                     T - A
                     G - C          A A
                    T     G G T C C     A
        G A        G      | | | | |     G
      T     C G C G       C C A G G     C
      G     | | | |                 A T
      G     G C G C
        A A        G     ATGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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