The detailed information of tRNA gene sequence


Sequence ID>FG090100235
Genome IDAE017348
Search identical group
Phylum/ClassBasidiomycota
SpeciesCryptococcus neoformans var. neoformans JEC21
Chromosome chr8
Start position on genome 155880
End posion on genome 155953
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
gggaagaacaaagattcagaaatctgttattatagctgagtccgataagcaaatatgcatcgtacgtacatataggaaaaagaatcaagaaaagtatgcG
tRNA gene sequence 
GGCTTCTTAGTATAACGGTTAGTACATGAGATTCTGATTCTCGTGACCTGGGTTCGACTC
CCAGAGAGGCCTGat
Downstream region at tRNA end position 
acttttgcttttttgcacttccccctccagcggagagccggcaagctgttcacactttttgatctactaccacttttggcggactcttcgagtatgcata
Secondary structure (Cloverleaf model)
>FG090100235	Gln	CTG
                   G      TGat acttttgcttttttgcacttccccctccagcggagagccggcaagctgttcacactttttgatctactaccacttttggcggactcttcgagtatgcata
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     C - G
                     T - A          T C
                    T     G A C C C     A
      C A A        A      | | | | |     G
    G       T A T G       C T G G G     C
    G       + | | |                 T T
    T       G T A C
      T A          A     TGAC
                    T + G
                    G - C
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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