The detailed information of tRNA gene sequence


Sequence ID>FG090100308
Genome IDCR382137
Search identical group
Phylum/ClassAscomycota
SpeciesDebaryomyces hansenii CBS767
Chromosome chrE
Start position on genome 224494
End posion on genome 224423
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gtagtttttttcttaaaattgatctttagatgaaaaaatgatagcagatcttctaagcagaacgtatattattacttactaattagaacttcaagaagac
tRNA gene sequence 
TCCGATATAGTGTAACGGCTAGCACGGTTCGCTTTCACCGAGCAAACCCGGGTTCGACTC
CCGGTATCGGAAttc
Downstream region at tRNA end position 
tttttttatttttattgtcattccaatcttattcccatcttaccttagaaaatactctgcaatagagaagatgattgatatatagttatagttatgtaaa
Secondary structure (Cloverleaf model)
>FG090100308	Glu	TTC
                   c      Attc tttttttatttttattgtcattccaatcttattcccatcttaccttagaaaatactctgcaatagagaagatgattgatatatagttatagttatgtaaa
                     T - A
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T C
                    T     G G C C C     A
      C A A        A      | | | | |     G
    G       T G T G       C C G G G     C
    G       + | | |                 T T
    C       G C A C
      T A          G     AAAC
                    G - C
                    T + G
                    T - A
                    C - G
                    G - C
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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