The detailed information of tRNA gene sequence


Sequence ID>FG090100357
Genome IDAL590442
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr2
Start position on genome 179296
End posion on genome 179377
Amino Acid Leu
Anticodon AAG
Upstream region at tRNA start position 
gcttttgtctcttccatttgggtatgtttttttagtttcaggtattcacggactcattacagtctggcgcagtccaaagtcctggggggattgcactgta
tRNA gene sequence 
GGTTGGATGGCCGAGTGGTCCAAGGCGCTGGCTTAAGGTGCCAGTCTCTCAGGAGGCGTG
GGTTCGAACCCCACTCCAGCCAttt
Downstream region at tRNA end position 
tgtttctaacagccgcctaattttttgaactcagaacatagatattcaaaatggtttacttggtatgagatgatcaaagcaaacataggcagccatccct
Secondary structure (Cloverleaf model)
>FG090100357	Leu	AAG
                   a      Attt tgtttctaacagccgcctaattttttgaactcagaacatagatattcaaaatggtttacttggtatgagatgatcaaagcaaacataggcagccatccct
                     G - C
                     G - C
                     T + G
                     T - A
                     G - C
                     G - C
                     A - T          C A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C C A        G     TCTCTCAGGAGGC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  T       T
                  T       G
                    A A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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