The detailed information of tRNA gene sequence


Sequence ID>FG090100360
Genome IDAL590443
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr3
Start position on genome 41045
End posion on genome 41127
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atttattaagccttgagttacaaagatgatcttttcttctggcttagtttctctgacgggtaagctccgtggggaattggtatgacacgcctgcctgtga
tRNA gene sequence 
GGTGCCGTGGCCGAGTGGTCCAAGGCGACGGATTTGAAATCCGTTGAGGTTCTCTCTCGC
TGGTTCGAATCCAGTCGGCATCGttt
Downstream region at tRNA end position 
tgccgtccagaaattatggactccaccaccaatacaaggacttttttgcttgaatatacacaaaaaatattttcagatgatgaagagggactccgtagaa
Secondary structure (Cloverleaf model)
>FG090100360	Ser	TGA
                   a      Gttt tgccgtccagaaattatggactccaccaccaatacaaggacttttttgcttgaatatacacaaaaaatattttcagatgatgaagagggactccgtagaa
                     G - C
                     G + T
                     T - A
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T G A C C     A
      T G A        G      + | | | |     G
    G       G C C G       G C T G G     C
    G         | | |                 T T
    T       A G G C
      C C A        G     TGAGGTTCTCTCTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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