The detailed information of tRNA gene sequence


Sequence ID>FG090100361
Genome IDAL590443
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr3
Start position on genome 152612
End posion on genome 152684
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gcaataaaaggtttatacaagaaacagacttctttcgactcaaagacagatggcctgtgttgagagcaaccacttctgtgggcccctccggggggctatc
tRNA gene sequence 
GCCCTTGTAGTGTAGTGGTTATCACGCATCCTTTACACGGATGAGGTCCTTGGTTCGATC
CCGAGCGGGGGCAttt
Downstream region at tRNA end position 
ttgtccatgtcatctatgcataggtatgtatttaattattgtttgtactttggatatgtggattgaaatccttgatcggctgccaatctatttcactgac
Secondary structure (Cloverleaf model)
>FG090100361	Val	TAC
                   c      Attt ttgtccatgtcatctatgcataggtatgtatttaattattgtttgtactttggatatgtggattgaaatccttgatcggctgccaatctatttcactgac
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     T + G
                     G - C          C T
                    T     G A G C C     A
      T G A        A      | | + | |     G
    G       T G T G       C T T G G     C
    G         | | |                 T T
    T       T C A C
      T A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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