The detailed information of tRNA gene sequence


Sequence ID>FG090100363
Genome IDAL590443
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr3
Start position on genome 44699
End posion on genome 44627
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gatacatggaagggatggagatggattgtttctatcggctggattgtacaggcgcttctgagcggcttgtgcgatttgatctattcgatgtcagctaaca
tRNA gene sequence 
TCTTCCATAGTGTAGTGGTATATCATATCCGCCTGTCACGCGGGTGACCCGGGTTCGAAT
CCCGGTGGGAGAGaaa
Downstream region at tRNA end position 
ttccttttaacctcgtgatgcttctgagtatcccatccatcatcttaggtgaatcttaatccaaaggtgcaacgtttatttctctggaagcatgaagtcc
Secondary structure (Cloverleaf model)
>FG090100363	Asp	GTC
                   a      Gaaa ttccttttaacctcgtgatgcttctgagtatcccatccatcatcttaggtgaatcttaatccaaaggtgcaacgtttatttctctggaagcatgaagtcc
                     T - A
                     C - G
                     T - A
                     T + G
                     C - G
                     C - G
                     A - T          T A
                    T     G G C C C     A
      T G A        A      | | | | |     G
    G       T G T G       C C G G G     C
    G         | | +                 T T
    T       T C A T
      A T A        A     TGAC
                    T + G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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