The detailed information of tRNA gene sequence


Sequence ID>FG090100364
Genome IDAL590444
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr4
Start position on genome 25454
End posion on genome 25528
Amino Acid Ile
Anticodon AAT
Upstream region at tRNA start position 
tatatcatctggctctggaatttctctatccataagggacttgattttcctgcgaaatgtgctctcggccgcaatattgtcacaaataactgaaaatata
tRNA gene sequence 
GTTCTGGTAGCTCAGTCGGTCAGAGCGTCGTGCTAATAACGCGAAGGTCCAGGGTTCGAG
CCCCTGTCGGAACACtt
Downstream region at tRNA end position 
ttgttgagttctgcctcatctatctcttgtccatttatctctccatctcttcatgttgtacaactttaggcatttctcaaacaatctgcagtccacatca
Secondary structure (Cloverleaf model)
>FG090100364	Ile	AAT
                   a      ACtt ttgttgagttctgcctcatctatctcttgtccatttatctctccatctcttcatgttgtacaactttaggcatttctcaaacaatctgcagtccacatca
                     G - C
                     T - A
                     T - A
                     C - G
                     T + G
                     G - C
                     G + T          C G
                    T     G T C C C     A
      T G A        A      | | | | |     G
    C       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    T + G
                    G - C
                  C       A
                  T       A
                    A A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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