The detailed information of tRNA gene sequence


Sequence ID>FG090100367
Genome IDAL590444
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr4
Start position on genome 22702
End posion on genome 22629
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ttattatgtaatcaaatgcgtaattagacacaagaaattattgatgggtaaacaacagacacccaaggcgccaaatggctgtggttcttggagctagcaa
tRNA gene sequence 
GCCTGGCTAGCTCAACAGGATAGAGCGACAGACTCTTAATCTGTAGGCTGCGGGTTCGAG
TCCCGCGCTGGGTAaag
Downstream region at tRNA end position 
gttttttgttggctagctatgctgatgagctgtgaaaagcttccgtaaagcacaccttcacttgatcttcagggggaagtgttccagaccatatcaagct
Secondary structure (Cloverleaf model)
>FG090100367	Lys	CTT
                   a      Aaag gttttttgttggctagctatgctgatgagctgtgaaaagcttccgtaaagcacaccttcacttgatcttcagggggaagtgttccagaccatatcaagct
                     G + T
                     C - G
                     C - G
                     T + G
                     G + T
                     G - C
                     C - G          T G
                    T     C G C C C     A
      C A A        A      | | | | |     G
    A       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGCT
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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