The detailed information of tRNA gene sequence


Sequence ID>FG090100369
Genome IDAL590445
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr5
Start position on genome 118514
End posion on genome 118587
Amino Acid Thr
Anticodon AGT
Upstream region at tRNA start position 
gttttatagaataaaagtcttctgtggtctttgtgttgtggtctgtagggggatgtgatggcagcctctgcagtatggcagactggatgttgggtggcta
tRNA gene sequence 
GCCGCCATAGCTAAGTGGTTATAGCGCCAGTTTAGTAAACTGGAGGCCCCGAGTTCGAGT
CTCGGTGGTGGCTCtg
Downstream region at tRNA end position 
ttttgtcccgttgttggtggttccgacgatttgtttttgatcctcaaaataattcgggtacttgagccctaaatgtcgcagaagctccagaaaccaagct
Secondary structure (Cloverleaf model)
>FG090100369	Thr	AGT
                   a      TCtg ttttgtcccgttgttggtggttccgacgatttgtttttgatcctcaaaataattcgggtacttgagccctaaatgtcgcagaagctccagaaaccaagct
                     G - C
                     C - G
                     C - G
                     G + T
                     C - G
                     C - G
                     A - T          T G
                    T     G G C T C     A
      T G A        A      | | | | |     G
    G       A T C G       C C G A G     C
    G       | | | |                 T T
    T       T A G C
      T A          G     AGGCC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    A G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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