The detailed information of tRNA gene sequence


Sequence ID>FG090100370
Genome IDAL590446
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr6
Start position on genome 120887
End posion on genome 120959
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aataaattctttttatcttgagctttttactccttgagcccaggatgggggctccgtgctgtgcctgatcaaaagacaggggatgcgggcttttcttata
tRNA gene sequence 
GACGGTGTGGCGCAACGGTAGCGCGTCGGATTCCAGTCCCGAAGGTTCTAGGTTCAAATC
CTGGCTCCGTCACtt
Downstream region at tRNA end position 
ctttttcttgctgccgtcctaggaacgtggtgttgcattgttcctccagggcctgctacacatcccgaacgtagtaaacccaaacaaaacaatcccttat
Secondary structure (Cloverleaf model)
>FG090100370	Trp	CCA
                   a      ACtt ctttttcttgctgccgtcctaggaacgtggtgttgcattgttcctccagggcctgctacacatcccgaacgtagtaaacccaaacaaaacaatcccttat
                     G - C
                     A - T
                     C - G
                     G - C
                     G - C
                     T   T
                     G - C          T A
                    T     G G T C C     A
        A A        G      | + | | |     A
      C     C G C G       C T A G G     C
      G     | | | |                 T T
      G     G C G C
        T A        G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A   C
                  T       T
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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