The detailed information of tRNA gene sequence


Sequence ID>FG090100376
Genome IDAL590447
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr7
Start position on genome 177782
End posion on genome 177853
Amino Acid Ala
Anticodon AGC
Upstream region at tRNA start position 
agtgtgattttttatcatttgctttttttcatctagttcctatgtgatgtctaggtcttttccctggagactggatggagatggatgactgaggccgaga
tRNA gene sequence 
GGGGAGTTAGCTCAGCGGTAGAGCGCTTGCTTAGCATGTAAGAGGTCATGGGTTCAAATC
CCATATTCTCCAttt
Downstream region at tRNA end position 
tactcttcagggagatggagtatccagagtgtgccaggcaaatagatctgaaaccatcaaattttcttttgaaacacagatgcatttaggatgtgatgcg
Secondary structure (Cloverleaf model)
>FG090100376	Ala	AGC
                   a      Attt tactcttcagggagatggagtatccagagtgtgccaggcaaatagatctgaaaccatcaaattttcttttgaaacacagatgcatttaggatgtgatgcg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     G + T
                     T - A          T A
                    T     T A C C C     A
        G A        A      | | | | |     A
      C     C T C G       A T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G + T
                    C - G
                  T       T
                  T       A
                    A G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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