The detailed information of tRNA gene sequence


Sequence ID>FG090100377
Genome IDAL590447
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr7
Start position on genome 113069
End posion on genome 112989
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
cacccattggaaataagaggattctttcgttcaaatatatgtttgtctcgagggcagatggcgcacggtgtagcgatagaggatccacgggggcatgcaa
tRNA gene sequence 
GTCAGGATGGCCGAGTGGTCTAAGGCGGTACGTTCAGGTCGTATTCTCATTGAGGCACGG
GTTCGAATCCCGTTTCTGACAtct
Downstream region at tRNA end position 
ttttgtagccacgccagaacaagaccgccctgctcgcatcccccatgattctctttcttcttatagacctggagaaagagaactgggagctgacaacaag
Secondary structure (Cloverleaf model)
>FG090100377	Leu	CAG
                   a      Atct ttttgtagccacgccagaacaagaccgccctgctcgcatcccccatgattctctttcttcttatagacctggagaaagagaactgggagctgacaacaag
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C
                     G + T
                     A - T          T A
                    T     T G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A C G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TCTCATTGAGGC
                    G + T
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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