The detailed information of tRNA gene sequence


Sequence ID>FG090100384
Genome IDAL590448
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr8
Start position on genome 32736
End posion on genome 32665
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gaacagagaagatttcataagtgtttcaaacataagggcatccagcaaagacttcctggacaatagtaagtgctgatggcatcggggtggttgcataata
tRNA gene sequence 
TCCTTGTTGGTCCAGTGGTTAGGATAGCTGCCTCTCACGCAGCAGGCTCGGGTTCGATTC
CCGGACGAGGAAtct
Downstream region at tRNA end position 
tcctttttctcagaaggaaatctaggcaacaagagattgtgcatgcccaatacatcgaaatatcagtcacattgtttaatcactagtggtagactatctg
Secondary structure (Cloverleaf model)
>FG090100384	Glu	CTC
                   a      Atct tcctttttctcagaaggaaatctaggcaacaagagattgtgcatgcccaatacatcgaaatatcagtcacattgtttaatcactagtggtagactatctg
                     T - A
                     C - G
                     C - G
                     T - A
                     T + G
                     G - C
                     T - A          T T
                    T     G G C C C     A
      T G A        G      + | | | |     G
    G       C C T G       T C G G G     C
    G       | | | +                 T T
    T       G G A T
      T A          A     AGGC
                    G - C
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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