The detailed information of tRNA gene sequence


Sequence ID>FG090100389
Genome IDAL590449
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr10
Start position on genome 17842
End posion on genome 17770
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ttgaagttcttcctcgggctttccattgagggcttgtgcagaagagtttttgtcgggtttcctggcctgaggtagttcggaatgtggacaagcgccatca
tRNA gene sequence 
GCCTTTGTAGCGCAGTGGTTAACGCGTTCGGCTGTTAACCGAAAGGTCGAGAGTTCGAGT
CTCTCCAAGGGCGttt
Downstream region at tRNA end position 
tgtcggtttgcacacagcatataagtctttcctgcatccataaccctggaaaatggatacaaaaggaagtctagccgataagattgacatattctttcta
Secondary structure (Cloverleaf model)
>FG090100389	Asn	GTT
                   a      Gttt tgtcggtttgcacacagcatataagtctttcctgcatccataaccctggaaaatggatacaaaaggaagtctagccgataagattgacatattctttcta
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A
                     T - A
                     G - C          T G
                    T     C T C T C     A
      T G A        A      | | | | |     G
    G       C G C G       G A G A G     C
    G         | | |                 T T
    T       A C G C
      T A          G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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