The detailed information of tRNA gene sequence


Sequence ID>FG090100390
Genome IDAL590450
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr11
Start position on genome 57751
End posion on genome 57823
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccactttgtgaggggccttctttacccccaggatggcagcatctccaaagcatgcctctgcacaggccgaaattaatggccacttacctctgaaaggta
tRNA gene sequence 
GTGACATTGGCGCAATAGGTAGCGCGCTGGTCTCATAATCCAGAGGTTGCGAGTTCGAGT
CTCGCATGTCGCAttt
Downstream region at tRNA end position 
tgacccatcctgccttgctaagttaagccacatgcttttattacggatcttatcatgctgttctgaatttatttccttctctacccacaaacttttttct
Secondary structure (Cloverleaf model)
>FG090100390	Met	CAT
                   a      Attt tgacccatcctgccttgctaagttaagccacatgcttttattacggatcttatcatgctgttctgaatttatttccttctctacccacaaacttttttct
                     G - C
                     T + G
                     G - C
                     A - T
                     C - G
                     A - T
                     T - A          T G
                    T     C G C T C     A
      T A A        G      | | | | |     G
    A       C G C G       G C G A G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTT
                    C - G
                    T - A
                    G - C
                    G - C
                    T   T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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