The detailed information of tRNA gene sequence


Sequence ID>FG090100392
Genome IDAL590450
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr11
Start position on genome 53750
End posion on genome 53670
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
tttccatgttataaggtgtatgatgaaaagtaaaagttgtgctccagtacttgaaggcactctaccgtgcacctgttgagatggctctgcagccaacgta
tRNA gene sequence 
GGTACAATGGCCGAGCGGTCTAAGGCGCTGGAATTAGGCTCCAGTCTCATTGAGGCGGGG
GTTCGAATCCCTCTTGTGCCAaca
Downstream region at tRNA end position 
ttttgatgaatgcaagcaagaatagccccacagcacagacatctaaacccgtttggatttattttatatctagaacatgctgccgtaatagcagaacata
Secondary structure (Cloverleaf model)
>FG090100392	Leu	TAG
                   a      Aaca ttttgatgaatgcaagcaagaatagccccacagcacagacatctaaacccgtttggatttattttatatctagaacatgctgccgtaatagcagaacata
                     G - C
                     G - C
                     T + G
                     A - T
                     C - G
                     A - T
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TCTCATTGAGGC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  A       C
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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