The detailed information of tRNA gene sequence


Sequence ID>FG090100394
Genome IDAL590451
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr9
Start position on genome 210542
End posion on genome 210613
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tttcaaaggagatctagccaagtataccatctcggatggggctctgtattgccaatgctaataaccattggctacgatgggcgtctctatatagatagaa
tRNA gene sequence 
TTCCTACTGGTCTAGCGGTTAGGATGTCTGCCTTTCAAGCAGGAGGTGGGGGTTCGATTC
CCCCGTAGGGAAttt
Downstream region at tRNA end position 
cttttgaccttcaaaaagaaatttcagagtgaggaatcaggccatggcgcccaggcatatataaatccaatttatttccatcagaaggctctcctcatac
Secondary structure (Cloverleaf model)
>FG090100394	Glu	TTC
                   a      Attt cttttgaccttcaaaaagaaatttcagagtgaggaatcaggccatggcgcccaggcatatataaatccaatttatttccatcagaaggctctcctcatac
                     T - A
                     T + G
                     C - G
                     C - G
                     T - A
                     A - T
                     C - G          T T
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       T C T G       G G G G G     C
    G       + | | +                 T T
    T       G G A T
      T A          G     AGGT
                    T + G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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