The detailed information of tRNA gene sequence


Sequence ID>FG090100507
Genome IDCM000437
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome ch1
Start position on genome 694990
End posion on genome 695073
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtggtattagaaactagagactgcaccgggaagaattcctattttagcgattttttgtccatgatttgagctaaaaagtgcatcgaaagaatcgtgcgtT
tRNA gene sequence 
GGCAACTTGTCCGAGCGGTTAAGGAGAAAGACTTGAAATCTTTTGGGCTATGCCCGCGCA
GGTTCGAGTCCTGCAGTTGTCGTtt
Downstream region at tRNA end position 
ttttttgcaattttagcgacttaatagaatgttcatattaaaacggatgtactgaagagagtcaatgatcgtattgaagaattaaaaatttacataaata
Secondary structure (Cloverleaf model)
>FG090100507	Ser	TGA
                   T      GTtt ttttttgcaattttagcgacttaatagaatgttcatattaaaacggatgtactgaagagagtcaatgatcgtattgaagaattaaaaatttacataaata
                     G - C
                     G + T
                     C - G
                     A - T
                     A - T
                     C - G
                     T - A          T G
                    T     C G T C C     A
      C G A        G      | | | | |     G
    G       G C C T       G C A G G     C
    G         | | |                 T T
    T       A G G A
      T A          G     TGGGCTATGCCCGC
                    A - T
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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