The detailed information of tRNA gene sequence


Sequence ID>FG090100510
Genome IDCM000437
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome ch1
Start position on genome 1284436
End posion on genome 1284507
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
gctgaaaaattaactgttcctaacgttttttcacggaaaaatgcttatatgccggactctgatcttgctgatcaatgatagtacatttttgccgagaaat
tRNA gene sequence 
GGTTGTATAGTGTAGTGGTTATCACTTTCGGTTTTGATCCGGACAACCCCGGTTCGAATC
CGGGTACGACCTttt
Downstream region at tRNA end position 
tttaagttagtatttttatcgcatcttatactcacgtgatcgatctatttttttcttatgatgagcttgggggatttttcattaatctgtaataaagtta
Secondary structure (Cloverleaf model)
>FG090100510	Gln	TTG
                   t      Tttt tttaagttagtatttttatcgcatcttatactcacgtgatcgatctatttttttcttatgatgagcttgggggatttttcattaatctgtaataaagtta
                     G - C
                     G - C
                     T - A
                     T + G
                     G - C
                     T - A
                     A - T          T A
                    T     G G G C C     A
      T G A        A      | | | | |     G
    G       T G T G       C C C G G     C
    G         | | |                 T T
    T       T C A C
      T A          T     CAAC
                    T - A
                    T + G
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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