The detailed information of tRNA gene sequence


Sequence ID>FG090100512
Genome IDCM000437
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome ch1
Start position on genome 1673517
End posion on genome 1673588
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gattggtcgtagttctgacattttgaaattttactattgcggtatggattttttacattagctcctgtaccacttttagcgaatttgcataaaatattga
tRNA gene sequence 
GCCTCCTTAGCTTAGTGGTAGAGCGTTGCACTTGTAATGCAAAGGTCGCTAGTTCAATTC
TGGCAGGAGGCAttt
Downstream region at tRNA end position 
tttttgattatactgtaattgttatgctttggcaatagagtcccctaaatgctgcttcatctctatcgaagaaactttggatgaataattaatgtcgata
Secondary structure (Cloverleaf model)
>FG090100512	Thr	TGT
                   a      Attt tttttgattatactgtaattgttatgctttggcaatagagtcccctaaatgctgcttcatctctatcgaagaaactttggatgaataattaatgtcgata
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     C - G
                     T - A          T T
                    T     C G G T C     A
        G A        A      | | + | |     A
      T     T T C G       G C T A G     C
      G     + | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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