The detailed information of tRNA gene sequence


Sequence ID>FG090100513
Genome IDCM000437
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome ch1
Start position on genome 1719519
End posion on genome 1719594
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ctgattgattggtcgtagttctgacattccggggcaatagttaaggcacgtgatttacagcaaatccgtactgaatgtgtgatatttctcaaagaaaatT
tRNA gene sequence 
GACTTCGTGGCCAAGTTGGCTAAGGCGTAAGACTGTTAATCTTAAGATCGTGAGTTCGAC
CCTCACCGAGGTCGTgt
Downstream region at tRNA end position 
ttttttgctaatgaaagcaagatctgggaactgactaatggacggtgaactaactaatagatggcttaatctactttcttatgttttggttaaataacgt
Secondary structure (Cloverleaf model)
>FG090100513	Asn	GTT
                   T      GTgt ttttttgctaatgaaagcaagatctgggaactgactaatggacggtgaactaactaatagatggcttaatctactttcttatgttttggttaaataacgt
                     G - C
                     A - T
                     C - G
                     T + G
                     T - A
                     C - G
                     G - C          C C
                    T     C A C T C     A
      T G A        G      | | | | |     G
    T       A C C G       G T G A G     C
    G         | | |                 T T
    G       A G G C
      C T A        G     AGATC
                    T - A
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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