The detailed information of tRNA gene sequence


Sequence ID>FG090100516
Genome IDCM000437
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome ch1
Start position on genome 2104052
End posion on genome 2104123
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taaaagatactgcatacaaaatattaaatattgcggcacggatgttttatcttcatacgcagaatgtgacataaatagtcgaacctttcatcaacaaaga
tRNA gene sequence 
TCCGTGATAGTTTAGTGGCTAGAATTACCGCTTGTCGCGTGGTAGACCGGGGTTCAATTC
CCCGTCGCGGAGatt
Downstream region at tRNA end position 
tcttgcgcaaatggtttagtggtaaaatccaacgttgccatcgttgggcccccggttcgattccgggtttgcgcattcttttttactatttcaccacgca
Secondary structure (Cloverleaf model)
>FG090100516	Asp	GTC
                   a      Gatt tcttgcgcaaatggtttagtggtaaaatccaacgttgccatcgttgggcccccggttcgattccgggtttgcgcattcttttttactatttcaccacgca
                     T - A
                     C - G
                     C - G
                     G - C
                     T + G
                     G - C
                     A - T          T T
                    T     G C C C C     A
      T G A        A      | | | | |     A
    G       T T T G       C G G G G     C
    G       + | | +                 T T
    C       G A A T
      T A          T     AGAC
                    A - T
                    C - G
                    C - G
                    G + T
                    C - G
                  T       C
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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