The detailed information of tRNA gene sequence


Sequence ID>FG090100517
Genome IDCM000437
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome ch1
Start position on genome 2104130
End posion on genome 2104202
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
tcgaacctttcatcaacaaagatccgtgatagtttagtggctagaattaccgcttgtcgcgtggtagaccggggttcaattccccgtcgcggagatttcT
tRNA gene sequence 
GCGCAAATGGTTTAGTGGTAAAATCCAACGTTGCCATCGTTGGGCCCCCGGTTCGATTCC
GGGTTTGCGCATtc
Downstream region at tRNA end position 
ttttttactatttcaccacgcaatataagactttgtacaatgtaccttcttcgtctatcttctattgtagaaagttgcttgttcctagcgcagtctggaa
Secondary structure (Cloverleaf model)
>FG090100517	Gly	GCC
                   T      ATtc ttttttactatttcaccacgcaatataagactttgtacaatgtaccttcttcgtctatcttctattgtagaaagttgcttgttcctagcgcagtctggaa
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     A - T
                     A - T          T T
                    T     G G G C C     A
        G A        G      | | | | |     G
      T     T T T G       C C C G G     C
      G     | | | +                 T T
      G     A A A T
        T A        C     GGCC
                    C - G
                    A - T
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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