The detailed information of tRNA gene sequence


Sequence ID>FG090100520
Genome IDCM000437
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome ch1
Start position on genome 3179586
End posion on genome 3179504
Amino Acid Leu
Anticodon AAG
Upstream region at tRNA start position 
tgagcgaataggatacttaatatttaaatttttgggcagatttttcaatttagtgttgagacaatttggatgtagaaggaaaaatgtcgcataggaattg
tRNA gene sequence 
GGTACTCTGGCCGAGTTGGTCTAAGGCGCCAGGGTAAGGTCCTGGTCTCTTCGGAGGCGC
GAGTTCGAATCTCGCGGGTATCAtta
Downstream region at tRNA end position 
acacaccagcaatttctatcaattacctattttcctttatttttgcattttatagtggtgctattctgttgtgaaactaggtttgcaattttttggtgtt
Secondary structure (Cloverleaf model)
>FG090100520	Leu	AAG
                   g      Atta acacaccagcaatttctatcaattacctattttcctttatttttgcattttatagtggtgctattctgttgtgaaactaggtttgcaattttttggtgtt
                     G - C
                     G + T
                     T - A
                     A - T
                     C - G
                     T + G
                     C - G          T A
                    T     C G C T C     A
    T T G A        G      | | | | |     G
  G         G C C G       G C G A G     C
  G           | | |                 T T
  T         A G G C
    C T A          G     TCTCTTCGGAGGC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  G       T
                  T       G
                    A A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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