The detailed information of tRNA gene sequence


Sequence ID>FG090100521
Genome IDCM000437
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome ch1
Start position on genome 2850258
End posion on genome 2850185
Amino Acid Ile
Anticodon AAT
Upstream region at tRNA start position 
atagagataattattcttatattagtgtaattcatgtgaccaaaaacccgtgattttaatactaactgatttgaatagtaagattctatcgcacaattaa
tRNA gene sequence 
GGTCCCTTGGCCCAGTTGGTTAAGGCGTGGTGCTAATAACGCCAAGATCAGCAGTTCGAT
CCTGCTAGGGACCAttg
Downstream region at tRNA end position 
tttttttttgtattttgaatacattcacatgaagccagaacacttgaaggactaacaagctttagtctgaacagtgttgaaatggttgttccattttttt
Secondary structure (Cloverleaf model)
>FG090100521	Ile	AAT
                   a      Attg tttttttttgtattttgaatacattcacatgaagccagaacacttgaaggactaacaagctttagtctgaacagtgttgaaatggttgttccattttttt
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          C T
                    T     T C G T C     A
      T G A        G      | | | | |     G
    T       C C C G       A G C A G     C
    G         | | |                 T T
    G       A G G C
      T T A        G     AGATC
                    T - A
                    G - C
                    G - C
                    T + G
                    G - C
                  C       A
                  T       A
                    A A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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