The detailed information of tRNA gene sequence


Sequence ID>FG090100523
Genome IDCM000437
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome ch1
Start position on genome 2504117
End posion on genome 2504044
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
acgattacaaaaatattagatcggttattcattgcacatgatcaaaatcacgtgattttgatgcatcgtaagtgcagtgttacataacaattgtaagaaA
tRNA gene sequence 
GCTCGTATGGCGCAGTGGTAGCGCAGCAGATTGCAAATCTGTTGGTCCTTAGTTCAATCC
TGAGTGCGAGCTTtc
Downstream region at tRNA end position 
cttagtttttctctcttttttgtatgtttatcacgtgatatatactcaaattgaaatactcagactacagatgctcctatatttacttgtattgattcta
Secondary structure (Cloverleaf model)
>FG090100523	Cys	GCA
                   A      TTtc cttagtttttctctcttttttgtatgtttatcacgtgatatatactcaaattgaaatactcagactacagatgctcctatatttacttgtattgattcta
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     T + G
                     A - T          C T
                    T     G A G T C     A
        G A        G      | | + | |     A
      T     C G C G       C T T A G     C
      G     | | | |                 T T
      G     G C G C
        T A        A     TGGTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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