The detailed information of tRNA gene sequence


Sequence ID>FG090100524
Genome IDCM000437
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome ch1
Start position on genome 2460297
End posion on genome 2460226
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
taacaattttttgaaaagcatgtgataaaacgcaggtgataaaaatcacgtgattttcaaagagtggagaaaaagtactgaccatgaaatttaattatta
tRNA gene sequence 
TCCGATATAGTGTAACGGCTAGCACGGTTCGCTTTCACCGAGCAGACCCGGGTTCGACTC
CCGGTATCGGAAgta
Downstream region at tRNA end position 
ttttttaatatattaatatctttatcacgtgatcgtgatgttcatcgcaggtattttttttcacttctactgatttatatttcctatgaattaagttgat
Secondary structure (Cloverleaf model)
>FG090100524	Glu	TTC
                   a      Agta ttttttaatatattaatatctttatcacgtgatcgtgatgttcatcgcaggtattttttttcacttctactgatttatatttcctatgaattaagttgat
                     T - A
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T C
                    T     G G C C C     A
      C A A        A      | | | | |     G
    G       T G T G       C C G G G     C
    G       + | | |                 T T
    C       G C A C
      T A          G     AGAC
                    G - C
                    T + G
                    T - A
                    C - G
                    G - C
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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