The detailed information of tRNA gene sequence


Sequence ID>FG090100532
Genome IDCM000437
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome ch1
Start position on genome 591898
End posion on genome 591826
Amino Acid Thr
Anticodon AGT
Upstream region at tRNA start position 
cccagcctatttctgagtttttggacgaaattaacgtgacttttatcccgtgattttcgcaccgtctaactcacatataacaaccatagtttcgaaatta
tRNA gene sequence 
GCCTTTATGGCCAAGTTGGTAAGGCACCTCACTAGTAATGAGGAGATCGTCAGTTCGAAT
CTGGCTGAAGGCAtgt
Downstream region at tRNA end position 
tttttttcgcaaccatttctattaaacgcttatctttttttattactacatagaacttatctttatctatacatgagtgaacgtcccagatcagctacaa
Secondary structure (Cloverleaf model)
>FG090100532	Thr	AGT
                   a      Atgt tttttttcgcaaccatttctattaaacgcttatctttttttattactacatagaacttatctttatctatacatgagtgaacgtcccagatcagctacaa
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A
                     T + G
                     A - T          T A
                    T     C G G T C     A
      T G A        G      | + | | |     G
    T       A C C G       G T C A G     C
    G         | | |                 T T
    G       A G G C
      T A          A     AGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    A G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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