The detailed information of tRNA gene sequence


Sequence ID>FG090100534
Genome IDCM000437
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome ch1
Start position on genome 354005
End posion on genome 353931
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tgatatacaccacgtgctgtttatcacgtttttggattggtgtatatgcaggaaattgaattatacaaaaattgaatattgaagaaaatgtaatgaaatT
tRNA gene sequence 
GGGCGTGTGGCGTAGTTGGTAGCGCGTTTGCCTTGCAAGCAAAAGGTCACTGGTTCGATT
CCTGTCTCGTCCATat
Downstream region at tRNA end position 
attttaattttttttaatgttcgttaattccaaggtctttctgttccgagagtccaaaaaataatgattcggttcctttgtttagctgccagaagcacgg
Secondary structure (Cloverleaf model)
>FG090100534	Ala	TGC
                   T      ATat attttaattttttttaatgttcgttaattccaaggtctttctgttccgagagtccaaaaaataatgattcggttcctttgtttagctgccagaagcacgg
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     T   T
                     G - C          T T
                    T     T G T C C     A
      T G A        G      | |   | |     G
    T       T G C G       A C T G G     C
    G       + | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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