The detailed information of tRNA gene sequence


Sequence ID>FG090100548
Genome IDCP000498
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome chr4
Start position on genome 236994
End posion on genome 237067
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ttgacgaatcacccttagaaatttgaaaaaaaagccagaaatctgaaagggagagaataatatcaccaatacaatttccagtaatctgcagcatagcaaT
tRNA gene sequence 
GGGCGGTTGGTGTAGTGGTTAACATATCTGCCTTCCAAGCAGGTGACATGGGTTCGATTC
CCGTACCGCTCATag
Downstream region at tRNA end position 
aatatttgctctagtgacatgattttttgccccagttttcgacgaaggtagttgccggggaaatgtaaggccaggttgttcacgatgtggtagcgccgag
Secondary structure (Cloverleaf model)
>FG090100548	Gly	TCC
                   T      ATag aatatttgctctagtgacatgattttttgccccagttttcgacgaaggtagttgccggggaaatgtaaggccaggttgttcacgatgtggtagcgccgag
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T T
                    T     T G C C C     A
      T G A        G      | + | | |     G
    G       T G T G       A T G G G     C
    G       | | | +                 T T
    T       A C A T
      T A          A     TGAC
                    T + G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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