The detailed information of tRNA gene sequence


Sequence ID>FG090100553
Genome IDCP000498
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome chr4
Start position on genome 1302407
End posion on genome 1302332
Amino Acid Val
Anticodon AAC
Upstream region at tRNA start position 
gaaatatatgaaaaaactaaagtcacgtgcatatcacgcgtaattcagcacgtgattttttgaattcacattgatatacagtatgatgttcaacaagaaT
tRNA gene sequence 
GGTTGCGTGGTCTAGTTGGTTATGGCATCTGCTTAACACGCAGAACGTCCCCAGTTCGAT
CCTGGGCGGAATCATtc
Downstream region at tRNA end position 
ctatttcttgttgcgcaaatggtttagtggtaaaatccaacgttgccatcgttgggcccccggttcgattccgggtttgcgcatcttttttgccatacta
Secondary structure (Cloverleaf model)
>FG090100553	Val	AAC
                   T      ATtc ctatttcttgttgcgcaaatggtttagtggtaaaatccaacgttgccatcgttgggcccccggttcgattccgggtttgcgcatcttttttgccatacta
                     G - C
                     G + T
                     T - A
                     T - A
                     G   G
                     C - G
                     G - C          C T
                    T     G G G T C     A
      T G A        G      | | | | |     G
    T       T C T G       C C C A G     C
    G         | + |                 T T
    G       T G G C
      T T A        A     ACGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    A A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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