The detailed information of tRNA gene sequence


Sequence ID>FG090100557
Genome IDCP000498
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome chr4
Start position on genome 1135152
End posion on genome 1135080
Amino Acid Ala
Anticodon AGC
Upstream region at tRNA start position 
cagttgcctaagaagaggtcccttggcccagttggttaaggcgtggtgctaataacgccaagatcagcagttcgatcctgctagggaccatttcttccaa
tRNA gene sequence 
GGGCGTGTGGCGTAGTTGGTAGCGCGTTCGCTTAGCATGCGAAAGGTCTCCGGTTCGACT
CCGGACTCGTCCAttt
Downstream region at tRNA end position 
ctttttataatctgtttttttagaactttctggagttcagtgtacttttttcaatggatatggaatgcagtcaatttagtattatttatatattaacctt
Secondary structure (Cloverleaf model)
>FG090100557	Ala	AGC
                   a      Attt ctttttataatctgtttttttagaactttctggagttcagtgtacttttttcaatggatatggaatgcagtcaatttagtattatttatatattaacctt
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     T   T
                     G - C          T C
                    T     A G G C C     A
      T G A        G      | | | | |     G
    T       T G C G       T C C G G     C
    G       + | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  T       T
                  T       A
                    A G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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